PacBio sequencing of Batrachochytrium salamandrivorans isolate AMFP14... - SRA

SRX7862249: PacBio sequencing of Batrachochytrium salamandrivorans isolate AMFP14/2
1 PACBIO_SMRT (Sequel) run: 991,001 spots, 5.9G bases, 1.4Gb downloads

Design: Genomic DNA was isolated using yeast protocol for Qiagen 100G genomic tips and checked using the Qubit dsDNA HS Assay Kit. PacBio Sequel library prep, quality checks and sequencing on a PacBio Sequel machine was performed by BaseClear (BaseClear B.V., Sylviusweg 74, 2333 BE LEIDEN, The Netherlands), quality checks following library prep indicated the presence of shorter fragments and so size selection was performed on reads from these samples before sequencing.

Submitted by: Ghent University

Study: Batrachochytrium salamandrivorans diversity

PRJNA610831 • SRP251868 • All experiments • All runs

show Abstracthide Abstract

Sequencing of seven isolates from five outbreaks within the European outbreak of Batrachochytrium salamandrivorans, aiming to characterize diversity and epidemiological patterns.

Sample:

SAMN14316976 • SRS6271140 • All experiments • All runs

Organism: Batrachochytrium salamandrivorans

Library:

Name: AMFP14/2.pb

Instrument: Sequel

Strategy: WGS

Source: GENOMIC

Selection: size fractionation

Layout: SINGLE

Runs: 1 run, 991,001 spots, 5.9G bases, 1.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR11252131	991,001	5.9G	1.4Gb	2021-10-17

ID:: 10290094

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